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SRX007443: Sequencing and assembly of Actinomyces graevenitzii C83 genome for HMP Jumpstart project.
1 LS454 (454 GS FLX) run: 52,600 spots, 15.3M bases, 30.5Mb downloads

UUID: 04a74dbd-0f55-473e-be5a-00478e00d919
Design: 10X fragment coverage and 10X physical paired coverage on 454
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA38761 • SRP001073 • All experiments • All runs
show Abstracthide Abstract
<b><i>Actinomyces graevenitzii</i> C83</b>. This strain will be used for comparative genome analysis.
Sample: Generic sample from Actinomyces graevenitzii C83
SAMN00103211 • SRS004699 • All experiments • All runs
Organism: Actinomyces graevenitzii C83
Library:
Name: 454-2795
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
AGGAAGGTC
14  forward           reverse

Experiment attributes: (show all 7 attributes...) (hide...)
analysis_type: Assembly
gssr_id: 28787.2
lsid: BROAD:SEQUENCING_SAMPLE:28787.2
material_type: Genomic DNA
project: G2109
sample_type: Sputum
work_request: 19097
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-04-14 11:47:33.0454BaseCaller2.0.00.22
Runs: 1 run, 52,600 spots, 15.3M bases, 30.5Mb
Run# of Spots# of BasesSizePublished
SRR02255852,60015.3M30.5Mb2009-08-31

ID:
7717

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